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List of Putative Anti-biofilm Peptides (ABPs)


FDA Approved PeptidesPredicted Anti-biofilm
(No. of Model(s))
Selected Models and Prediction
Whole AACSelected 14 residue compositionNT5 BPPWhole AACSelected 8 residue compositionNT5 BPP
DrugBank IDPeptide SequencePeptide LengthNo. of Model(s)SVM basedSVM basedSVM basedWEKA basedWEKA basedWEKA based
DB08888   APSFDCGKPQVEPKKCPGR194Biofilm-inactiveBiofilm-inactiveBiofilm-activeBiofilm-activeBiofilm-activeBiofilm-active
DB00017   CSNLSTCVLGKLSQELHKLQTYPRTNTGSGTP322Biofilm-inactiveBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB00067   CYFQNCPRG92Biofilm-inactiveBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB00107   CYIQNCPLG92Biofilm-inactiveBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB04921   DENPVVHFFKNIVTPRT171Biofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactive
DB00006   FPRPGGGGNGDFEEIPEEYL202Biofilm-inactiveBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB01309   FVKQHLCGSHLVEALYLVCGERGFFYTPET303Biofilm-activeBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB01306   FVNQHLCGSHLVEALYLVCGERGFFYTDKT303Biofilm-activeBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB00046   FVNQHLCGSHLVEALYLVCGERGFFYTKPT303Biofilm-activeBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB01307   FVNQHLCGSHLVEALYLVCGERGFFYTPK294Biofilm-activeBiofilm-inactiveBiofilm-activeBiofilm-activeBiofilm-inactiveBiofilm-active
DB00030   DB00071   DB08914   FVNQHLCGSHLVEALYLVCGERGFFYTPKT303Biofilm-activeBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB00047   FVNQHLCGSHLVEALYLVCGERGFFYTPKTRR323Biofilm-activeBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB00047   GIVEQCCTSICSLYQLENYCG212Biofilm-inactiveBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB00030   DB00046   DB00071   DB01306   DB01307   DB01309   DB08914   GIVEQCCTSICSLYQLENYCN212Biofilm-inactiveBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB06655   HAEGTFTSDVSSYLEGQAAKEEFIIAWLVKGRG334Biofilm-activeBiofilm-inactiveBiofilm-activeBiofilm-activeBiofilm-inactiveBiofilm-active
DB08900   HGDGSFSDEMNTILDNLAARDFINWLIQTKITD331Biofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB00021   HSDGTFTSELSRLRDSARLQRLLQGLV271Biofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB00040   HSQGTFTSDYSKYLDSRRAQDFVQWLMNT291Biofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB05332   IEGPTLRQWLAARA144Biofilm-activeBiofilm-activeBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB04897   KLLLLKLLLLKLLLLKLLLLK215Biofilm-inactiveBiofilm-activeBiofilm-activeBiofilm-activeBiofilm-activeBiofilm-active
DB05685   MKHLLLLLLCVFLVKSQGVNDNEEGFFS284Biofilm-inactiveBiofilm-inactiveBiofilm-activeBiofilm-activeBiofilm-activeBiofilm-active
DB04985   PGDSTRKCMDLKGNK151Biofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB00007   PHWSYLLR82Biofilm-inactiveBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB05875   RPKPQQFFGLM113Biofilm-inactiveBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-activeBiofilm-active
DB04900   SDAAVDTSSEITTKDLKEKKEVVEEAEN280Biofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactive
DB04899   SPKMVQGSGCFGRKMDRISSSSGLGCKVLRRH320Biofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactiveBiofilm-inactive
DB06285   SVSEIQLMHNLGKHLNSMERVEWLRKKLQDVHNF343Biofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-activeBiofilm-activeBiofilm-inactive
DB01284   SYSMEHFRWGKPVGKKRRPVKVYP244Biofilm-activeBiofilm-activeBiofilm-inactiveBiofilm-activeBiofilm-activeBiofilm-inactive
DB05671   TDLQERGDNDISPFSGDGQPFKD232Biofilm-inactiveBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB00010   YADAIFTNSYRKVLGQLSARKLLQDIMSRQ302Biofilm-inactiveBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active
DB00109   YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF362Biofilm-inactiveBiofilm-inactiveBiofilm-activeBiofilm-inactiveBiofilm-inactiveBiofilm-active


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Citation: If you are using this server, please cite:

Gupta, P. et al. dPABBs: A Novel in silico Approach for Predicting and Designing Anti-biofilm Peptides. Sci. Rep. 6, 21839; doi: 10.1038/srep21839 (2016).



Developed by: OSDD Unit, CSIR- HQ, New Delhi- 110001