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anurag
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Showing 1 changed file with 0 additions and 28 deletions Show diff stats
Supporting_Files/Generating_random_networks.m
@@ -1,28 +0,0 @@
-clear;clc;
-
-%% Generating Random Networks
-
-[ndrugs, ntargets] = size(adjacencyR);
-nedges = sum(adjacencyR(:));
-A=zeros(ndrugs,ntargets);
-t=randperm(numel(A));
-A(t(1:nedges))=1;
-
-clearvars t
-%% Calculate NBI through drug target adjacency matrix
-%A=[1, 1, 0, 1;0,1, 1, 0; 0, 1, 1,1];
-
-Ky = diag(1./sum(A));
-n = size(A,1);
-m = size(A,2);
-Ky(isinf(Ky)| isnan(Ky))=0;
-kx = sum(A,2)';
-Nx = repmat(1./kx,n,1);
-Nx(isinf(Nx) | isnan(Nx))=0;
-kx(isinf(kx) | isnan(kx))=0;
-W = (A*Ky)';
-W1 = A*W;
-W2 = Nx .* W1;
-R = W2*A;
-
-clearvars Ky n m kx Nx W W1 W2
...	...	@@ -1,28 +0,0 @@
1		-clear;clc;
2		-
3		-%% Generating Random Networks
4		-
5		-[ndrugs, ntargets] = size(adjacencyR);
6		-nedges = sum(adjacencyR(:));
7		-A=zeros(ndrugs,ntargets);
8		-t=randperm(numel(A));
9		-A(t(1:nedges))=1;
10		-
11		-clearvars t
12		-%% Calculate NBI through drug target adjacency matrix
13		-%A=[1, 1, 0, 1;0,1, 1, 0; 0, 1, 1,1];
14		-
15		-Ky = diag(1./sum(A));
16		-n = size(A,1);
17		-m = size(A,2);
18		-Ky(isinf(Ky)\| isnan(Ky))=0;
19		-kx = sum(A,2)';
20		-Nx = repmat(1./kx,n,1);
21		-Nx(isinf(Nx) \| isnan(Nx))=0;
22		-kx(isinf(kx) \| isnan(kx))=0;
23		-W = (A*Ky)';
24		-W1 = A*W;
25		-W2 = Nx .* W1;
26		-R = W2*A;
27		-
28		-clearvars Ky n m kx Nx W W1 W2